Selected papers metabolite fingerprinting

1. Widiarsih, S., M. Nagel, A. Börner, K. Feussner, I. Feussner, and C. Möllers: Inheritance of seed quality and seed germination in two doubled haploid populations of oilseed rape segregating for acid detergent lignin (ADL) content. Euphytica 217, 161 (2021).

2. Kasper, K.H., I.N. Abreu, K. Feussner, K. Zienkiewicz, C. Herrfurth, T. Ischebeck, D. Janz, A. Majcherczyk, K. Schmitt, O. Valerius, G.H. Braus, I. Feussner, and A. Polle: Multi-omics analysis of xylem sap uncovers dynamic modulation of poplar defenses by ammonium and nitrate. bioRxiv 446139 (2021).

3. Mohnike, L., D. Rekhter, W. Huang, K. Feussner, H. Tian, C. Herrfurth, Y. Zhang, and I. Feussner: The glycosyltransferase UGT76B1 modulates N-hydroxy-pipecolic acid homeostasis and plant immunity. Plant Cell 33, 735–749 (2021).

4. Feussner, K., and I. Feussner: Ex vivo metabolomics: A powerful approach for functional gene annotation. Trends Plant Sci. 25, 829-830 (2020).

5. Green, K.A., D. Berry, K. Feussner, C.J. Eaton, A. Ram, C.H. Mesarich, P. Solomon, I. Feussner, and B. Scott: Lolium perenne apoplast metabolomics for identification of novel metabolites produced by the symbiotic fungus Epichloë festucae. New Phytol. 227, 559-571 (2020).

6. Feussner, K., and I. Feussner. Comprehensive LC-MS-based metabolite fingerprinting approach for plant and fungal-derived samples. In High-Throughput Metabolomics: Methods and Protocols. A. D'Alessandro, editor. Springer New York, New York, NY. 167-185 (2019).

7. Rekhter, D., D. Lüdke, Y. Ding, K. Feussner, K. Zienkiewicz, V. Lipka, M. Wiermer, Y. Zhang, and I. Feussner: Isochorismate-derived biosynthesis of the plant stress hormone salicylic acid. Science 365, 498-502 (2019)

8. Haroth, S., K. Feussner, A.A. Kelly, K. Zienkiewicz, A. Shaikhqasem, C. Herrfurth, and I. Feussner: The glycosyltransferase UGT76E1 significantly contributes to 12-O-glucosylpyranosyl-jasmonic acid formation in wounded Arabidopsis thaliana leaves. J. Biol. Chem. 294, 9858-9872 (2019).

9. Stringlis, I.A., K. Yu, K. Feussner, R. de Jonge, S. Van Bentum, M.C. Van Verk, R.L. Berendsen, P.A.H.M. Bakker, I. Feussner, and C.M.J. Pieterse: MYB72-dependent coumarin exudation shapes root microbiome assembly to promote plant health. Proc. Natl. Acad. Sci. USA 115, E5213-E5222 (2018).

10. Ding, P., D. Rekhter, Y. Ding, K. Feussner, L. Busta, S. Haroth, S. Xu, X. Li, R. Jetter, I. Feussner, and Y. Zhang: Characterization of a pipecolic acid biosynthesis pathway required for systemic acquired resistance. Plant Cell 28, 2603-2615 (2016).

11. Bruckhoff, V.*, S. Haroth*, K. Feussner*, S. König, F. Brodhun, and I. Feussner: Functional characterization of CYP94-genes and identification of a novel jasmonate catabolite in flowers. PLoS ONE 11, e0159875 (2016). *shared first authors

12. Popko, J., C. Herrfurth, K. Feussner, T. Ischebeck, T. Iven, R. Haslam, M. Hamilton, O. Sayanova, J. Napier, I. Khozin-Goldberg, and I. Feussner: Metabolome analysis reveals betaine lipids as major source for triglyceride formation, and the accumulation of sedoheptulose during nitrogen-starvation of Phaeodactylum tricornutum. PLoS ONE 11, e0164673 (2016).

13. Bayram, Ö., K. Feussner, M. Dumkow, C. Herrfurth, I. Feussner, and G.H. Braus: Changes of global gene expression and secondary metabolite accumulation during light-dependent Aspergillus nidulans development. Fungal Genet. Biol. 87, 30-53 (2016).

14. Kaever, A., M. Landesfeind, K. Feussner, A. Mosblech, I. Heilmann, B. Morgenstern, I. Feussner, and P. Meinicke: MarVis-Pathway: integrative and exploratory pathway analysis of non-targeted metabolomics data. Metabolomics 11, 764-777 (2015).

15. Sarikaya-Bayram, Ö., Ö. Bayram, K. Feussner, J.-H. Kim, H.-S. Kim, A. Kaever, I. Feussner, K.-S. Chae, D.-M. Han, K.-H. Han, and G.H. Braus: Membrane-bound methyltransferase complex VapA-VipC-VapB guides epigenetic control of fungal development. Dev. Cell 29, 406-420 (2014).

16. Landesfeind, M., A. Kaever, K. Feussner, C. Thurow, C. Gatz, I. Feussner, and P. Meinicke: Integrative study of Arabidopsis thaliana metabolomic and transcriptomic data with the interactive MarVis-Graph software. PeerJ 2, e239 (2014).

17. Kaever, A., M. Landesfeind, K. Feussner, B. Morgenstern, I. Feussner, and P. Meinicke: Meta-analysis of pathway enrichment: Combining independent and dependent omics data sets. PLoS ONE 9, e89297 (2014).

18. König, S., K. Feussner, A. Kaever, M. Landesfeind, C. Thurow, P. Karlovsky, C. Gatz, A. Polle, and I. Feussner: Soluble phenylpropanoids are involved in the defense response of Arabidopsis against Verticillium longisporum. New Phytol. 202, 823-837 (2014).

19. Tanaka, S., T. Brefort, N. Neidig, A. Djamei, J. Kahnt, W. Vermerris, S. Koenig, K. Feussner, I. Feussner, and R. Kahmann: A secreted Ustilago maydis effector promotes virulence by targeting anthocyanin biosynthesis in maize. eLife 3, e01355 (2014).

20. König, S., K. Feussner, M. Schwarz, A. Kaever, T. Iven, M. Landesfeind, P. Ternes, P. Karlovsky, V. Lipka, and I. Feussner: Arabidopsis mutants of sphingolipid fatty acid α-hydroxylases accumulate ceramides and salicylates. New Phytol. 196, 1086-1097 (2012).

21. Gerke, J., Ö. Bayram, K. Feussner, M. Landesfeind, E. Shelest, I. Feussner, and G. H. Braus: Breaking the silence: protein stabilization uncovers silenced biosynthetic gene clusters in the fungus Aspergillus nidulans. Appl. Env. Microbiol. 78, 8234-8244 (2012).

22. Floerl, S., A. Majcherczyk, M. Possienke, K. Feussner, H. Tappe, C. Gatz, I. Feussner, U. Kües, and A. Polle: Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana. PLoS ONE 7, e31435 (2012).

23. Kaever, A., M. Landesfeind, M. Possienke, K. Feussner, I. Feussner, and P. Meinicke: MarVis-Filter: Ranking, filtering, adduct and isotope correction of mass spectrometry data. J. Biomed. Biotechnol. 2012, 263910 (2012).

24. Djamei, A., K. Schipper, F. Rabe, A. Ghosh, V. Vincon, J. Kahnt, S. Osorio, T. Tohge, A.R. Fernie, I. Feussner, K. Feussner, P. Meinicke, Y.-D. Stierhof, H. Schwarz, B. Macek, M. Mann, and R. Kahmann: Metabolic priming by a secreted fungal effector. Nature 478, 395-398 (2011).

25. Pommerrenig, B., K. Feussner, W. Zierer, V. Rabinovych, F. Klebl, I. Feussner, and N. Sauer: Phloem-specific expression of yang cycle genes and identification of novel yang cycle enzymes in Plantago and Arabidopsis. Plant Cell 23, 1904-1919 (2011).

26. Nahlik, K., M. Dumkow, Ö. Bayram, K. Helmstaedt, S. Busch, O. Valerius, J. Gerke, M. Hoppert, E. Schwier, L. Opitz, M. Westermann, S. Grond, K. Feussner, C. Göbel, A. Kaever, P. Meinecke, I. Feussner, and G.H. Braus: The COP9 signalosome mediates transcriptional and metabolic response for hormones, oxidative stress protection and cell wall rearrangement during fungal development. Mol. Microbiol. 78, 964–979 (2010).